STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL45413.1Starch synthase catalytic domain protein; Identified by match to protein family HMM PF08323. (295 aa)    
Predicted Functional Partners:
EFL45133.1
Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128; match to protein family HMM PF02806; match to protein family HMM PF02922.
 
 
 0.988
glgP
Alpha-glucan phosphorylase; Identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094.
 
 
 0.954
pulA
Pullulanase, type I; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02104; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.921
EFL46119.1
Putative 4-alpha-glucanotransferase; Identified by match to protein family HMM PF00686; match to protein family HMM PF02446.
  
 
 0.906
EFL45398.1
Hypothetical protein.
  
    0.831
EFL45162.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
     
 0.824
EFL45429.1
Hypothetical protein.
       0.818
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
    0.697
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
       0.690
EFL46137.1
Alpha amylase, catalytic domain protein; Identified by match to protein family HMM PF00128; match to protein family HMM PF09087; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.634
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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