Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFL44942.1 | EFL44943.1 | HMPREF9296_0802 | HMPREF9296_0801 | Hypothetical protein. | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | 0.721 |
| EFL44942.1 | EFL44945.1 | HMPREF9296_0802 | HMPREF9296_0803 | Hypothetical protein. | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | 0.842 |
| EFL44943.1 | EFL44942.1 | HMPREF9296_0801 | HMPREF9296_0802 | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | Hypothetical protein. | 0.721 |
| EFL44943.1 | EFL44945.1 | HMPREF9296_0801 | HMPREF9296_0803 | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | 0.704 |
| EFL44945.1 | EFL44942.1 | HMPREF9296_0803 | HMPREF9296_0802 | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | Hypothetical protein. | 0.842 |
| EFL44945.1 | EFL44943.1 | HMPREF9296_0803 | HMPREF9296_0801 | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | 0.704 |
| EFL44945.1 | EFL46721.1 | HMPREF9296_0803 | HMPREF9296_2545 | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | SpoIID/LytB domain protein; Identified by match to protein family HMM PF08486; match to protein family HMM TIGR02669. | 0.507 |
| EFL44945.1 | EFL47018.1 | HMPREF9296_0803 | HMPREF9296_2152 | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.538 |
| EFL44945.1 | EFL47060.1 | HMPREF9296_0803 | HMPREF9296_2151 | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | Transporter gate domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF07670. | 0.538 |
| EFL44945.1 | alr | HMPREF9296_0803 | HMPREF9296_2570 | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.549 |
| EFL44945.1 | cgtA | HMPREF9296_0803 | HMPREF9296_0202 | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.430 |
| EFL44945.1 | dapA | HMPREF9296_0803 | HMPREF9296_0417 | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.450 |
| EFL44945.1 | dapB | HMPREF9296_0803 | HMPREF9296_0683 | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | Dihydrodipicolinate reductase; Identified by match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036; Belongs to the DapB family. | 0.465 |
| EFL44945.1 | nspC | HMPREF9296_0803 | HMPREF9296_1531 | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | Carboxynorspermidine decarboxylase; Identified by match to protein family HMM PF00278; match to protein family HMM TIGR01047. | 0.408 |
| EFL46721.1 | EFL44945.1 | HMPREF9296_2545 | HMPREF9296_0803 | SpoIID/LytB domain protein; Identified by match to protein family HMM PF08486; match to protein family HMM TIGR02669. | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | 0.507 |
| EFL47018.1 | EFL44945.1 | HMPREF9296_2152 | HMPREF9296_0803 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | 0.538 |
| EFL47018.1 | EFL47060.1 | HMPREF9296_2152 | HMPREF9296_2151 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Transporter gate domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF07670. | 0.682 |
| EFL47060.1 | EFL44945.1 | HMPREF9296_2151 | HMPREF9296_0803 | Transporter gate domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF07670. | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | 0.538 |
| EFL47060.1 | EFL47018.1 | HMPREF9296_2151 | HMPREF9296_2152 | Transporter gate domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF07670. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.682 |
| alr | EFL44945.1 | HMPREF9296_2570 | HMPREF9296_0803 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Transporter gate domain protein; Identified by match to protein family HMM PF07670. | 0.549 |
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