Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
traGConjugation system ATPase, TraG family; Identified by match to protein family HMM TIGR03783. (834 aa)    
Predicted Functional Partners:
EFL46497.1
Conjugative transposon protein TraE.
 
     0.847
traK
Conjugative transposon TraK protein; Identified by match to protein family HMM TIGR03781.
 
  
 0.811
traK-2
Conjugative transposon TraK protein; Identified by match to protein family HMM TIGR03781.
 
  
 0.811
traK-3
Conjugative transposon TraK protein; Identified by match to protein family HMM TIGR03781.
 
  
 0.811
EFL47304.1
Putative conjugative transposon TraK protein.
 
  
 0.802
traJ
Conjugative transposon TraJ protein; Identified by match to protein family HMM PF07863; match to protein family HMM TIGR03782.
 
   
 0.775
EFL46506.1
TraG family protein.
 
  
 0.775
EFL44971.1
TraG family protein.
 
  
 0.774
EFL47317.1
TraG family protein.
 
  
 0.774
EFL46483.1
TraG family protein.
 
  
 0.774
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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