STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL46506.1TraG family protein. (669 aa)    
Predicted Functional Partners:
EFL46496.1
Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.
 
     0.899
traG
Conjugation system ATPase, TraG family; Identified by match to protein family HMM TIGR03783.
 
  
 0.775
traG-2
Conjugation system ATPase, TraG family; Identified by match to protein family HMM TIGR03783.
 
  
 0.775
EFL47338.1
Conjugative transposon protein TraG; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.
 
  
 0.775
EFL46486.1
Conjugative transposon protein TraG; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
  
 0.775
traG-3
Conjugation system ATPase, TraG family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM TIGR03783.
 
  
 0.774
EFL46598.1
Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
 
  
 0.772
traJ
Conjugative transposon TraJ protein; Identified by match to protein family HMM PF07863; match to protein family HMM TIGR03782.
 
     0.771
traJ-2
Conjugative transposon TraJ protein; Identified by match to protein family HMM PF07863; match to protein family HMM TIGR03782.
 
     0.770
traJ-3
Conjugative transposon TraJ protein; Identified by match to protein family HMM PF07863; match to protein family HMM TIGR03782.
 
     0.770
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.