EFL46404.1 protein (Prevotella disiens) - STRING interaction network

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Score

EFL46404.1

RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588. (186 aa)

Predicted Functional Partners:

rplU

0.855

sufE

0.832

rplC

0.823

rplX

0.822

rsfS

0.806

rplQ

0.803

rplM

0.802

rplK

0.800

rplO

0.798

acpP

0.796

Your Current Organism:

Prevotella disiens

NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFL46404.1	acpP	HMPREF9296_0906	HMPREF9296_0344	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.796
EFL46404.1	rplC	HMPREF9296_0906	HMPREF9296_0252	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.823
EFL46404.1	rplK	HMPREF9296_0906	HMPREF9296_0264	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.800
EFL46404.1	rplM	HMPREF9296_0906	HMPREF9296_2210	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.802
EFL46404.1	rplO	HMPREF9296_0906	HMPREF9296_0233	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.798
EFL46404.1	rplQ	HMPREF9296_0906	HMPREF9296_0224	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.	0.803
EFL46404.1	rplU	HMPREF9296_0906	HMPREF9296_0452	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.855
EFL46404.1	rplX	HMPREF9296_0906	HMPREF9296_0241	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.822
EFL46404.1	rsfS	HMPREF9296_0906	HMPREF9296_2383	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.806
EFL46404.1	sufE	HMPREF9296_0906	HMPREF9296_0907	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	Fe-S metabolism associated domain protein; Identified by match to protein family HMM PF02657.	0.832
acpP	EFL46404.1	HMPREF9296_0344	HMPREF9296_0906	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	0.796
acpP	rplC	HMPREF9296_0344	HMPREF9296_0252	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.876
acpP	rplK	HMPREF9296_0344	HMPREF9296_0264	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.892
acpP	rplM	HMPREF9296_0344	HMPREF9296_2210	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.915
acpP	rplO	HMPREF9296_0344	HMPREF9296_0233	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.862
acpP	rplQ	HMPREF9296_0344	HMPREF9296_0224	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.	0.917
acpP	rplU	HMPREF9296_0344	HMPREF9296_0452	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.953
acpP	rplX	HMPREF9296_0344	HMPREF9296_0241	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.873
acpP	rsfS	HMPREF9296_0344	HMPREF9296_2383	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.850
rplC	EFL46404.1	HMPREF9296_0252	HMPREF9296_0906	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588.	0.823