Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFL44975.1 | EFL44979.1 | HMPREF9296_1000 | HMPREF9296_0999 | Rhs element Vgr protein; Identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646. | Hypothetical protein. | 0.888 |
| EFL44975.1 | EFL44981.1 | HMPREF9296_1000 | HMPREF9296_1007 | Rhs element Vgr protein; Identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646. | Hypothetical protein. | 0.876 |
| EFL44975.1 | EFL44987.1 | HMPREF9296_1000 | HMPREF9296_1005 | Rhs element Vgr protein; Identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646. | RHS repeat-associated core domain protein; Identified by match to protein family HMM PF05593; match to protein family HMM TIGR01643; match to protein family HMM TIGR03696. | 0.845 |
| EFL44975.1 | EFL44990.1 | HMPREF9296_1000 | HMPREF9296_0992 | Rhs element Vgr protein; Identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646. | Hypothetical protein. | 0.819 |
| EFL44975.1 | EFL45034.1 | HMPREF9296_1000 | HMPREF9296_0857 | Rhs element Vgr protein; Identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646. | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.777 |
| EFL44975.1 | EFL45041.1 | HMPREF9296_1000 | HMPREF9296_0862 | Rhs element Vgr protein; Identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646. | Putative lysozyme; Identified by match to protein family HMM PF04965. | 0.796 |
| EFL44975.1 | EFL45065.1 | HMPREF9296_1000 | HMPREF9296_0860 | Rhs element Vgr protein; Identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | 0.808 |
| EFL44975.1 | EFL45067.1 | HMPREF9296_1000 | HMPREF9296_0861 | Rhs element Vgr protein; Identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646. | Hypothetical protein. | 0.811 |
| EFL44975.1 | EFL45273.1 | HMPREF9296_1000 | HMPREF9296_2655 | Rhs element Vgr protein; Identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646. | Hypothetical protein. | 0.795 |
| EFL44975.1 | EFL46484.1 | HMPREF9296_1000 | HMPREF9296_2675 | Rhs element Vgr protein; Identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646. | Hypothetical protein. | 0.876 |
| EFL44979.1 | EFL44975.1 | HMPREF9296_0999 | HMPREF9296_1000 | Hypothetical protein. | Rhs element Vgr protein; Identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646. | 0.888 |
| EFL44979.1 | EFL44981.1 | HMPREF9296_0999 | HMPREF9296_1007 | Hypothetical protein. | Hypothetical protein. | 0.777 |
| EFL44979.1 | EFL44987.1 | HMPREF9296_0999 | HMPREF9296_1005 | Hypothetical protein. | RHS repeat-associated core domain protein; Identified by match to protein family HMM PF05593; match to protein family HMM TIGR01643; match to protein family HMM TIGR03696. | 0.823 |
| EFL44979.1 | EFL44990.1 | HMPREF9296_0999 | HMPREF9296_0992 | Hypothetical protein. | Hypothetical protein. | 0.803 |
| EFL44979.1 | EFL45034.1 | HMPREF9296_0999 | HMPREF9296_0857 | Hypothetical protein. | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.783 |
| EFL44979.1 | EFL45041.1 | HMPREF9296_0999 | HMPREF9296_0862 | Hypothetical protein. | Putative lysozyme; Identified by match to protein family HMM PF04965. | 0.783 |
| EFL44979.1 | EFL45065.1 | HMPREF9296_0999 | HMPREF9296_0860 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | 0.777 |
| EFL44979.1 | EFL45067.1 | HMPREF9296_0999 | HMPREF9296_0861 | Hypothetical protein. | Hypothetical protein. | 0.780 |
| EFL44979.1 | EFL45273.1 | HMPREF9296_0999 | HMPREF9296_2655 | Hypothetical protein. | Hypothetical protein. | 0.774 |
| EFL44979.1 | EFL46484.1 | HMPREF9296_0999 | HMPREF9296_2675 | Hypothetical protein. | Hypothetical protein. | 0.777 |
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