STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL44981.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
EFL44984.1
Hypothetical protein.
 
     0.948
EFL44990.1
Hypothetical protein.
 
 
 0.893
EFL45273.1
Hypothetical protein.
 
 
 0.893
EFL45067.1
Hypothetical protein.
 
  
 0.852
EFL45065.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative.
 
 
 0.832
EFL45041.1
Putative lysozyme; Identified by match to protein family HMM PF04965.
 
   
 0.790
EFL45034.1
Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
 
     0.787
EFL44979.1
Hypothetical protein.
 
     0.783
EFL44975.1
Rhs element Vgr protein; Identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646.
 
  
 0.783
EFL45276.1
Hypothetical protein.
 
     0.783
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
Server load: medium (44%) [HD]