STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL46971.1Hypothetical protein. (89 aa)    
Predicted Functional Partners:
EFL46972.1
DNA binding domain, excisionase family; Identified by match to protein family HMM TIGR01764.
 
    
0.777
EFL46105.1
Hypothetical protein.
  
     0.773
EFL45325.1
Hypothetical protein.
  
     0.766
EFL47370.1
Hypothetical protein.
  
     0.766
EFL46313.1
Hypothetical protein.
  
     0.766
EFL46533.1
Hypothetical protein.
  
     0.690
EFL47095.1
Hypothetical protein.
 
     0.649
EFL47007.1
DNA binding domain, excisionase family.
  
     0.629
EFL46467.1
Conjugative transposon protein TraA.
  
     0.623
EFL46558.1
Pseudouridine synthase, RluA family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00849.
  
     0.614
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.