STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL45653.1Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. (168 aa)    
Predicted Functional Partners:
EFL45621.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535; overlaps another CDS with the same product name.
    
 0.830
EFL45583.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535; overlaps another CDS with the same product name.
 
    
0.824
EFL45706.1
Identified by match to protein family HMM PF04991.
       0.774
EFL45709.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative.
       0.718
EFL45603.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative.
       0.675
EFL45778.1
Aminotransferase, class I/II; Identified by match to protein family HMM PF00155.
  
    0.641
EFL45697.1
Glycosyltransferase, group 4 family; Identified by match to protein family HMM PF00953.
  
 
 0.577
EFL45124.1
Hypothetical protein.
 
     0.442
rmlD-2
Phage minor structural protein, N-terminal domain protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321.
  
 
 0.429
EFL46119.1
Putative 4-alpha-glucanotransferase; Identified by match to protein family HMM PF00686; match to protein family HMM PF02446.
  
  
  0.402
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.