STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL45110.1Identified by match to protein family HMM PF00899. (257 aa)    
Predicted Functional Partners:
EFL46465.1
Ankyrin repeat protein; Identified by match to protein family HMM PF00023.
  
 0.732
EFL46010.1
Hypothetical protein; Identified by glimmer; putative.
    
 0.722
EFL46809.1
Identified by match to protein family HMM PF00899.
 
0.664
EFL45170.1
Transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196.
 
    0.628
EFL45731.1
Transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196.
 
    0.608
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
  
  
 0.599
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
    
  0.578
EFL45658.1
Threonine/alanine tRNA ligase second additional domain protein; Identified by match to protein family HMM PF07973.
    
  0.578
thiE
Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
  
 
 0.557
EFL46380.1
Putative thiamine-phosphate diphosphorylase; Identified by match to protein family HMM PF02581.
  
 
 0.557
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
Server load: low (20%) [HD]