Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL47098.1Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00018; match to protein family HMM PF00515; match to protein family HMM PF07653; match to protein family HMM PF07719. (858 aa)    
Predicted Functional Partners:
EFL47133.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
 
 0.958
EFL47146.1
Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.
 
   
 0.956
EFL47137.1
Hypothetical protein.
 
  
 0.929
EFL47136.1
Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.
 
  
 0.929
EFL47043.1
Hypothetical protein.
 
   
 0.923
EFL47040.1
ATPase family associated with various cellular activities (AAA); Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.
 
   
 0.773
nifJ
Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
   
   0.603
EFL47006.1
Identified by match to protein family HMM PF01569.
       0.596
EFL47091.1
Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
  
    0.561
EFL44845.1
Hypothetical protein.
  
     0.480
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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