Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL47182.1Penicillin-binding protein, transpeptidase domain protein; Identified by match to protein family HMM PF00905. (423 aa)    
Predicted Functional Partners:
EFL45586.1
Transglycosylase; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912.
 
 
 0.950
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
 
 0.946
EFL46996.1
Transglycosylase; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912.
  
 
 0.928
EFL46769.1
Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family.
 0.927
EFL47157.1
Penicillin-binding protein, transpeptidase domain protein; Identified by match to protein family HMM PF00905; match to protein family HMM PF03793.
  
  
  0.918
EFL47085.1
Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family.
 
 0.873
dacB
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; Identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666.
  
  
 0.863
EFL46912.1
Putative penicillin-binding protein 2; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717.
  
  
 
0.851
EFL46802.1
Cell shape determining protein, MreB/Mrl family; Identified by match to protein family HMM PF06723; match to protein family HMM TIGR00904.
 
 
 
 0.818
mreC
Rod shape-determining protein MreC; Identified by match to protein family HMM PF04085; match to protein family HMM TIGR00219.
 
 
 0.797
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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