STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL47072.1Hypothetical protein. (435 aa)    
Predicted Functional Partners:
EFL46830.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719.
 
 0.903
EFL47014.1
Hypothetical protein.
    
 0.859
EFL47217.1
Amino acid kinase family; Identified by match to protein family HMM PF00696; match to protein family HMM TIGR00657; Belongs to the aspartokinase family.
 
     0.818
EFL45408.1
Polysaccharide deacetylase; Identified by match to protein family HMM PF01522.
 
 
 0.812
EFL47169.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.786
fbp
Firmicute fructose-1,6-bisphosphatase; Identified by match to protein family HMM PF06874.
       0.779
EFL45810.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515.
 
 
 0.773
EFL45670.1
Hypothetical protein.
 
 
 0.764
EFL46663.1
Conserved hypothetical protein TIGR03982; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
 
 0.759
EFL45521.1
Tetratricopeptide repeat protein.
  
 
 0.708
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.