Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFL45394.1 | EFL46979.1 | HMPREF9296_0493 | HMPREF9296_1056 | Putative CRISPR-associated protein, Csn1 family. | Transposase, IS4 family; Identified by match to protein family HMM PF01609. | 0.449 |
| EFL45394.1 | EFL47051.1 | HMPREF9296_0493 | HMPREF9296_2091 | Putative CRISPR-associated protein, Csn1 family. | Hypothetical protein; Identified by glimmer; putative. | 0.976 |
| EFL45394.1 | cas2 | HMPREF9296_0493 | HMPREF9296_2090 | Putative CRISPR-associated protein, Csn1 family. | CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. | 0.850 |
| EFL46059.1 | EFL46979.1 | HMPREF9296_2233 | HMPREF9296_1056 | Hypothetical protein. | Transposase, IS4 family; Identified by match to protein family HMM PF01609. | 0.480 |
| EFL46059.1 | EFL47051.1 | HMPREF9296_2233 | HMPREF9296_2091 | Hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.407 |
| EFL46071.1 | EFL47051.1 | HMPREF9296_2235 | HMPREF9296_2091 | Hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.402 |
| EFL46979.1 | EFL45394.1 | HMPREF9296_1056 | HMPREF9296_0493 | Transposase, IS4 family; Identified by match to protein family HMM PF01609. | Putative CRISPR-associated protein, Csn1 family. | 0.449 |
| EFL46979.1 | EFL46059.1 | HMPREF9296_1056 | HMPREF9296_2233 | Transposase, IS4 family; Identified by match to protein family HMM PF01609. | Hypothetical protein. | 0.480 |
| EFL46979.1 | EFL47051.1 | HMPREF9296_1056 | HMPREF9296_2091 | Transposase, IS4 family; Identified by match to protein family HMM PF01609. | Hypothetical protein; Identified by glimmer; putative. | 0.459 |
| EFL47051.1 | EFL45394.1 | HMPREF9296_2091 | HMPREF9296_0493 | Hypothetical protein; Identified by glimmer; putative. | Putative CRISPR-associated protein, Csn1 family. | 0.976 |
| EFL47051.1 | EFL46059.1 | HMPREF9296_2091 | HMPREF9296_2233 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein. | 0.407 |
| EFL47051.1 | EFL46071.1 | HMPREF9296_2091 | HMPREF9296_2235 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein. | 0.402 |
| EFL47051.1 | EFL46979.1 | HMPREF9296_2091 | HMPREF9296_1056 | Hypothetical protein; Identified by glimmer; putative. | Transposase, IS4 family; Identified by match to protein family HMM PF01609. | 0.459 |
| EFL47051.1 | cas2 | HMPREF9296_2091 | HMPREF9296_2090 | Hypothetical protein; Identified by glimmer; putative. | CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. | 0.932 |
| cas2 | EFL45394.1 | HMPREF9296_2090 | HMPREF9296_0493 | CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. | Putative CRISPR-associated protein, Csn1 family. | 0.850 |
| cas2 | EFL47051.1 | HMPREF9296_2090 | HMPREF9296_2091 | CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. | Hypothetical protein; Identified by glimmer; putative. | 0.932 |