Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL47190.1Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719. (543 aa)    
Predicted Functional Partners:
EFL47077.1
TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR04056.
 
    0.942
EFL46227.1
Hypothetical protein.
  
     0.760
EFL46163.1
Hypothetical protein.
  
     0.717
EFL45595.1
Hypothetical protein.
  
     0.714
EFL46243.1
Hypothetical protein.
  
     0.711
EFL47088.1
Hypothetical protein.
  
     0.711
EFL46658.1
Hypothetical protein.
  
     0.702
EFL45808.1
Hypothetical protein.
  
     0.696
EFL47352.1
Hypothetical protein.
 
     0.690
EFL46807.1
Hypothetical protein.
  
     0.680
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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