Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL47113.1TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715. (933 aa)    
Predicted Functional Partners:
EFL47041.1
Hypothetical protein.
 
     0.924
tonB-2
TonB-dependent receptor; Identified by match to protein family HMM PF03544; match to protein family HMM PF05569; match to protein family HMM TIGR01352.
  
  0.706
EFL45703.1
Identified by match to protein family HMM TIGR01352.
  
  0.631
tonB_6
TonB-dependent receptor; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352.
  
  0.629
EFL47022.1
Identified by match to protein family HMM PF01569.
 
     0.605
EFL46994.1
MORN repeat protein; Identified by match to protein family HMM PF07661.
   
  0.573
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
  0.573
EFL47134.1
TonB family domain protein.
   
  0.573
EFL46900.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
   
  0.573
EFL46718.1
Hypothetical protein.
   
  0.573
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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