STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL46088.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
EFL46355.1
Hypothetical protein.
  
    0.767
EFL45990.1
Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464.
  
    0.754
EFL46090.1
RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
 
     0.734
EFL45382.1
Hypothetical protein.
  
     0.730
EFL45141.1
Hypothetical protein.
  
     0.724
EFL46434.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719.
  
     0.720
yfiO
Outer membrane assembly lipoprotein YfiO; Identified by match to protein family HMM TIGR03302.
  
     0.704
EFL45900.1
Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family.
       0.692
EFL46379.1
Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244.
  
    0.670
EFL45086.1
Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103.
  
     0.665
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.