STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL46818.1Hypothetical protein. (427 aa)    
Predicted Functional Partners:
EFL46721.1
SpoIID/LytB domain protein; Identified by match to protein family HMM PF08486; match to protein family HMM TIGR02669.
 
     0.899
EFL46892.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
     0.877
EFL46757.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
     0.845
EFL45600.1
Identified by match to protein family HMM PF07313.
  
     0.760
EFL46453.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690.
  
     0.728
EFL46737.1
Hypothetical protein.
  
  
 
0.627
EFL45035.1
Hypothetical protein.
  
     0.515
EFL46248.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF02518.
     
 0.508
EFL45734.1
Acyltransferase; Identified by match to protein family HMM PF01553.
  
  
 0.449
nrfH
Cytochrome c nitrate reductase, small subunit; Identified by match to protein family HMM PF03264; match to protein family HMM TIGR03153.
  
  
  0.400
Your Current Organism:
Prevotella disiens
NCBI taxonomy Id: 866771
Other names: P. disiens FB035-09AN, Prevotella disiens FB035-09AN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.