Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEA00517.1Hypothetical protein. (268 aa)    
Predicted Functional Partners:
AEA01259.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.968
AEA01433.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.662
AEA00713.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 
 0.641
AEA00567.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 
 0.641
AEA00657.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 
 0.625
AEA01834.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 
 0.607
natA
Sodium extrusion ABC transporter, ATP-binding protein NatA; Identified by match to protein family HMM PF00005.
  
 
 0.607
AEA01159.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 
 0.607
AEA00872.1
Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943; match to protein family HMM PF03023.
       0.450
spo0J
Stage 0 sporulation protein J; Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family.
       0.400
Your Current Organism:
Aerococcus urinae
NCBI taxonomy Id: 866775
Other names: A. urinae ACS-120-V-Col10a, Aerococcus urinae ACS-120-V-Col10a
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