Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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AEA00872.1Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943; match to protein family HMM PF03023. (571 aa)    
Predicted Functional Partners:
AEA00987.1
Identified by match to protein family HMM PF06135; Belongs to the UPF0297 family.
  
     0.673
AEA00407.1
Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.
  
     0.671
AEA01620.1
Identified by match to protein family HMM PF07949.
  
    0.655
AEA00520.1
Putative ATP-dependent nuclease subunit A; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily.
  
     0.626
AEA00257.1
Identified by match to protein family HMM PF06103.
  
     0.614
mrnC
RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
  
     0.570
AEA00610.1
CamS sex pheromone family protein.
  
    0.531
AEA00999.1
Identified by match to protein family HMM PF06570.
 
     0.527
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.509
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.504
Your Current Organism:
Aerococcus urinae
NCBI taxonomy Id: 866775
Other names: A. urinae ACS-120-V-Col10a, Aerococcus urinae ACS-120-V-Col10a
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