STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTCT_0291Pyruvate formate-lyase 2 activating protein. (286 aa)    
Predicted Functional Partners:
MTCT_0292
Putative pyruvate-formate lyase.
 
  
 0.987
MTCT_0293
Polysaccharide biosynthesis protein.
       0.794
MTCT_0290
UDP-galactopyranose mutase.
       0.789
MTCT_0288
Glycosyltransferase.
     
 0.779
MTCT_0289
Glycosyltransferase.
     
 0.779
MTCT_1404
Anaerobic ribonucleoside-triphosphate reductase.
 
  
 0.751
MTCT_0255
Anaerobic ribonucleoside-triphosphate reductase activating protein.
 
   
 0.678
MTCT_0894
Alcohol dehydrogenase.
 
  
 0.652
MTCT_1445
Pyruvate formate-lyase activating protein.
  
     0.623
MTCT_0887
Pyruvate formate-lyase activating protein.
  
     0.578
Your Current Organism:
Methanothermobacter sp. CaT2
NCBI taxonomy Id: 866790
Other names: M. sp. CaT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.