STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTCT_0293Polysaccharide biosynthesis protein. (439 aa)    
Predicted Functional Partners:
MTCT_0290
UDP-galactopyranose mutase.
 
  
 0.951
MTCT_0289
Glycosyltransferase.
 
  
 0.881
MTCT_0288
Glycosyltransferase.
 
  
 0.880
MTCT_0292
Putative pyruvate-formate lyase.
 
     0.825
MTCT_0291
Pyruvate formate-lyase 2 activating protein.
       0.794
MTCT_1631
dTDP-glucose 4,6-dehydratase.
  
  
 0.736
MTCT_0497
Polysaccharide biosynthesis protein.
  
  
 0.638
MTCT_0498
Conserved hypothetical protein.
  
  
 0.638
MTCT_1632
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.638
MTCT_0284
Glycosyltransferase.
 
  
 0.627
Your Current Organism:
Methanothermobacter sp. CaT2
NCBI taxonomy Id: 866790
Other names: M. sp. CaT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.