STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTCT_0296Magnesium chelatase subunit. (1552 aa)    
Predicted Functional Partners:
MTCT_0390
Magnesium chelatase subunit.
 
  
 0.835
MTCT_0483
Magnesium chelatase subunit.
 
  
 0.832
MTCT_0599
Conserved hypothetical protein.
 
  
 0.798
MTCT_0598
Conserved hypothetical protein.
 
  
 0.653
MTCT_1377
cobalt-precorrin-6Y C(5)-methyltransferase.
  
  
 0.544
MTCT_0648
Conserved hypothetical protein.
 
    0.481
MTCT_0294
Conserved hypothetical protein.
       0.465
MTCT_0295
Conserved hypothetical protein.
       0.465
MTCT_0930
Transporter protein.
  
  
 0.461
MTCT_0992
Prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
 
  
 0.447
Your Current Organism:
Methanothermobacter sp. CaT2
NCBI taxonomy Id: 866790
Other names: M. sp. CaT2
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