STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTCT_0331Conserved hypothetical protein. (90 aa)    
Predicted Functional Partners:
MTCT_0332
Conserved hypothetical protein.
  
    0.935
MTCT_0333
Conserved hypothetical protein.
  
    0.931
MTCT_0330
Conserved hypothetical protein.
  
  
 0.924
MTCT_0329
Conserved hypothetical protein.
  
    0.922
MTCT_0328
Conserved hypothetical protein.
  
  
 0.837
MTCT_0335
NADH dehydrogenase I subunit N.
  
    0.833
MTCT_0334
Conserved hypothetical protein.
  
    0.777
MTCT_0336
Conserved hypothetical protein.
       0.673
MTCT_0340
Conserved hypothetical protein.
  
    0.645
MTCT_0341
Formate hydrogenlyase small subunit.
  
    0.617
Your Current Organism:
Methanothermobacter sp. CaT2
NCBI taxonomy Id: 866790
Other names: M. sp. CaT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.