STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTCT_0342Formate hydrogenlyase large subunit. (370 aa)    
Predicted Functional Partners:
MTCT_0341
Formate hydrogenlyase small subunit.
 
 
 0.999
MTCT_1131
Putative NADH dehydrogenase.
 
 
 0.995
MTCT_0337
NADH dehydrogenase membrane subunit.
 
 
 0.991
MTCT_1138
Hydrogenase subunit F.
 
 
 0.987
MTCT_1129
Putative NADH dehydrogenase.
 
 
 0.956
MTCT_1143
Putative monovalent cation/H+ antiporter subunit E.
 
 
 0.953
MTCT_1132
Ferredoxin.
  
 
 0.906
MTCT_0700
Hydrogenase expression/formation protein.
   
 
 0.892
MTCT_1135
Putative monovalent cation/H+ antiporter subunit B.
 
 
   0.879
MTCT_0343
Polyferredoxin.
  
    0.864
Your Current Organism:
Methanothermobacter sp. CaT2
NCBI taxonomy Id: 866790
Other names: M. sp. CaT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.