STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTCT_0700Hydrogenase expression/formation protein. (217 aa)    
Predicted Functional Partners:
hypA
Hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.999
MTCT_1027
Methyl viologen-reducing hydrogenase alpha subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.999
MTCT_1169
Conserved hypothetical protein.
 
   
 0.999
MTCT_1180
Coenzyme F420-reducing hydrogenase alpha subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.999
MTCT_0974
Hydrogenase formation protein.
 
  
 0.945
MTCT_0699
Conserved hypothetical protein.
       0.912
MTCT_1505
Hydrogenase formation protein.
 
  
 0.912
MTCT_1130
Putative NADH dehydrogenase.
   
 
 0.906
MTCT_0342
Formate hydrogenlyase large subunit.
   
 
 0.892
MTCT_0169
Hydrogenase expression/formation protein.
 
  
 0.833
Your Current Organism:
Methanothermobacter sp. CaT2
NCBI taxonomy Id: 866790
Other names: M. sp. CaT2
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