STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTCT_0891Conserved hypothetical protein. (313 aa)    
Predicted Functional Partners:
MTCT_1555
Type II/IV secretion system protein.
 
  
 0.938
MTCT_0890
Conserved hypothetical protein.
       0.881
MTCT_1556
Type II secretion system protein.
 
  
0.881
MTCT_0892
Aminopeptidase; Belongs to the peptidase M24B family.
       0.757
MTCT_0889
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.702
MTCT_1251
Conserved hypothetical protein; Belongs to the UPF0127 family.
 
     0.699
MTCT_0173
Conserved hypothetical protein.
 
     0.597
MTCT_0893
Conserved hypothetical protein.
  
    0.569
MTCT_0545
Conserved hypothetical protein.
 
     0.556
MTCT_1680
Cell division inhibitor.
 
  
 0.460
Your Current Organism:
Methanothermobacter sp. CaT2
NCBI taxonomy Id: 866790
Other names: M. sp. CaT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.