STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTCT_0902Universal stress protein. (143 aa)    
Predicted Functional Partners:
MTCT_0903
Chlorohydrolase.
       0.883
MTCT_0901
Inosine-5'-monophosphate dehydrogenase.
  
  
 0.780
MTCT_0900
Conserved hypothetical protein.
       0.688
MTCT_1462
acetyl-CoA synthetase.
     
 0.626
cdhA
acetyl-CoA decarbonylase/synthase complex alpha subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase.
     
 0.593
MTCT_0904
Lysyl endopeptidase.
  
    0.577
MTCT_0661
Putative transcriptional regulator.
  
  
 0.525
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
     
 0.491
MTCT_0547
methylguanidine-DNA methyltransferase.
  
    0.445
prf1
Peptide chain release factor 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.
  
  
 0.440
Your Current Organism:
Methanothermobacter sp. CaT2
NCBI taxonomy Id: 866790
Other names: M. sp. CaT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.