STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTCT_0940Ferredoxin. (67 aa)    
Predicted Functional Partners:
MTCT_0943
2-oxoglutarate ferredoxin oxidoreductase gamma subunit.
 
 
 0.998
MTCT_0941
2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
 
 
 0.997
MTCT_0942
2-oxoglutarate ferredoxin oxidoreductase beta subunit.
  
 
 0.995
sucC
succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
    
  0.994
MTCT_0461
2-oxoacid:ferredoxin oxidoreductase alpha subunit.
  
 
 0.964
sucD
succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
    
 0.937
MTCT_0462
2-oxoacid ferredoxin oxidoreductase beta subunit.
  
 
 0.931
MTCT_1504
Dihydrolipoamide dehydrogenase.
    
 0.907
MTCT_1366
Succinate dehydrogenase flavoprotein subunit.
  
 
 0.870
MTCT_0709
acetyl-CoA acetyltransferase.
    
 0.835
Your Current Organism:
Methanothermobacter sp. CaT2
NCBI taxonomy Id: 866790
Other names: M. sp. CaT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.