STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTCT_0986ABC transporter ATP-binding subunit. (312 aa)    
Predicted Functional Partners:
MTCT_0985
ABC transporter permease subunit.
 
  
 0.979
MTCT_1350
ABC transporter permease subunit.
  
 0.920
MTCT_0870
V-type ATP synthase subunit K; Belongs to the V-ATPase proteolipid subunit family.
   
 
 0.710
MTCT_0542
Putative ABC transporter ATP-binding subunit.
 
0.689
MTCT_0543
Putative ABC transporter permease and ATP-binding subunit.
0.686
MTCT_0274
Conserved hypothetical protein.
  
  
 0.662
MTCT_1493
Conserved hypothetical protein.
   
 
 0.606
MTCT_1042
Putative ABC transporter ATP-binding subunit.
     
 0.604
MTCT_1143
Putative monovalent cation/H+ antiporter subunit E.
 
   
 0.594
MTCT_0624
ABC transporter permease subunit.
    
 0.582
Your Current Organism:
Methanothermobacter sp. CaT2
NCBI taxonomy Id: 866790
Other names: M. sp. CaT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.