STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG44357.1Short-chain dehydrogenase/reductase family protein. (261 aa)    
Predicted Functional Partners:
CCG44079.1
Short-chain dehydrogenase/reductase family protein.
 
   0.657
gvpQ
Gas vesicle protein GvpQ.
  
     0.529
CCG45133.1
Short-chain dehydrogenase/reductase family protein.
 
   0.508
CCG44064.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
   0.500
CCG46528.1
3-oxoacyl-[acyl carrier protein] reductase.
 
   0.492
CCG45450.1
Short-chain dehydrogenase/reductase family protein.
 
   0.455
CCG46922.1
FAD-dependent oxidoreductase.
 
    0.454
CCG43935.1
Hypothetical protein.
  
     0.451
CCG44749.1
Hypothetical protein.
  
    0.410
Your Current Organism:
Halobacillus halophilus
NCBI taxonomy Id: 866895
Other names: H. halophilus DSM 2266, Halobacillus halophilus DSM 2266, Halobacillus halophilus str. DSM 2266, Halobacillus halophilus strain DSM 2266
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.