STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG44894.1Short-chain dehydrogenase/reductase family protein. (287 aa)    
Predicted Functional Partners:
CCG43944.1
Glutathione-dependent formaldehyde dehydrogenase.
 
  
 0.644
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
 0.603
CCG47126.1
FAD-dependent oxidoreductase / Rieske-type iron-sulfur protein.
 
 0.577
CCG44895.1
Hypothetical protein.
       0.503
cypC
Cytochrome P450.
  
 
 0.461
CCG43814.1
General stress protein.
  
    0.448
CCG45037.1
Hypothetical protein.
  
    0.430
fabD
Acyl-carrier-protein S-malonyltransferase.
 
 
 0.426
CCG46336.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
    0.418
fabF
3-oxoacyl-(acyl carrier protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.410
Your Current Organism:
Halobacillus halophilus
NCBI taxonomy Id: 866895
Other names: H. halophilus DSM 2266, Halobacillus halophilus DSM 2266, Halobacillus halophilus str. DSM 2266, Halobacillus halophilus strain DSM 2266
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.