STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yhjNConserved hypothetical protein. (354 aa)    
Predicted Functional Partners:
ykwB
Hypothetical protein.
 
     0.610
CCG45195.1
Hypothetical protein.
  
     0.568
yfkD
Conserved hypothetical protein.
  
     0.552
ywmB
Hypothetical protein.
  
     0.552
mhqD
Probable hydrolase MhqD.
       0.542
CCG45170.1
Hypothetical protein.
  
     0.517
CCG46088.1
Conserved hypothetical protein.
  
     0.440
CCG45725.1
Hypothetical protein.
  
     0.435
yozC
Hypothetical protein.
       0.430
CCG46179.1
MFS-type transporter (probable substrate maltose).
  
     0.430
Your Current Organism:
Halobacillus halophilus
NCBI taxonomy Id: 866895
Other names: H. halophilus DSM 2266, Halobacillus halophilus DSM 2266, Halobacillus halophilus str. DSM 2266, Halobacillus halophilus strain DSM 2266
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.