STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO97670.1Penicillin-binding protein 1B. (767 aa)    
Predicted Functional Partners:
SFP58196.1
Penicillin-binding protein 1A.
 
 
0.956
SFP04663.1
Penicillin-binding protein 1C.
  
  
0.935
SFP35064.1
Cell division protein FtsI (penicillin-binding protein 3).
 
 
 0.886
SFP46804.1
Sporulation related domain-containing protein.
    
 
 0.870
SFO96076.1
Penicillin-binding protein 2.
 
 
 0.846
SFP52666.1
Glutamine synthetase.
    
 0.697
SFP24918.1
UPF0755 protein.
  
   
 0.676
SFO96099.1
Rod shape determining protein RodA.
  
 
 
 0.657
SFP35210.1
Cell division protein FtsW.
  
 
 
 0.637
SFP35123.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase.
  
   
 0.579
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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