STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO98293.1TusA-related sulfurtransferase. (81 aa)    
Predicted Functional Partners:
SFP01214.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 
 0.960
SFO98268.1
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits.
 
  
 0.939
SFP51529.1
Sulfur carrier protein.
 
 
  0.825
SFP51478.1
Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif.
 
     0.759
SFP75730.1
DsrE/DsrF-like family protein.
  
 
 0.720
SFP01237.1
Cysteine desulfurase IscS.
   
 0.710
SFP21419.1
Cysteine desulfurase.
   
 0.710
SFP19496.1
Thiamine biosynthesis protein ThiI.
  
 
 0.657
SFO98610.1
Adenylylsulfate reductase subunit B.
 
  
 0.552
SFP51500.1
Thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily.
 
  
 0.528
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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