STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO98730.1Saccharopine dehydrogenase NADP binding domain-containing protein. (367 aa)    
Predicted Functional Partners:
SFO98704.1
Saccharopine dehydrogenase NADP binding domain-containing protein.
 
     0.923
SFO98913.1
Phosphopantetheine attachment site.
 
 
 0.853
SFP81755.1
AMP-binding enzyme.
 
 
 0.853
SFP81837.1
Nonribosomal peptide synthase.
 
 
 0.853
SFP39099.1
AMP-binding enzyme C-terminal domain-containing protein.
 
 
 0.838
SFP39072.1
AMP-binding enzyme C-terminal domain-containing protein.
 
 
 0.774
SFO98753.1
Hypothetical protein.
       0.773
SFP39117.1
Thioesterase domain-containing protein.
 
     0.755
SFO98813.1
Yersiniabactin salicyl-AMP ligase.
 
     0.715
SFP43180.1
4'-phosphopantetheinyl transferase superfamily protein.
 
   
 0.618
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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