STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO98813.1Yersiniabactin salicyl-AMP ligase. (530 aa)    
Predicted Functional Partners:
SFP38345.1
Acyl transferase domain-containing protein.
 0.996
SFP39072.1
AMP-binding enzyme C-terminal domain-containing protein.
 0.993
SFP81837.1
Nonribosomal peptide synthase.
 0.993
SFO98913.1
Phosphopantetheine attachment site.
 0.989
SFP81755.1
AMP-binding enzyme.
 0.981
SFP39534.1
3-phosphoshikimate 1-carboxyvinyltransferase.
 
   
  0.920
SFP39117.1
Thioesterase domain-containing protein.
  
 0.916
SFP30945.1
[acyl-carrier-protein] S-malonyltransferase.
   
 0.905
SFP39099.1
AMP-binding enzyme C-terminal domain-containing protein.
 
0.893
SFP09939.1
Two-component system, NarL family, sensor histidine kinase BarA.
   
 
 0.835
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.