STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP01569.1TPR repeat. (566 aa)    
Predicted Functional Partners:
SFP05378.1
TPR repeat.
  
     0.775
SFP07606.1
TPR repeat.
  
     0.775
SFP08404.1
Hypothetical protein.
  
     0.775
SFP08566.1
TPR repeat.
  
     0.775
SFP15903.1
Hypothetical protein.
  
     0.775
SFP26104.1
TPR repeat.
  
     0.775
SFP26435.1
TPR repeat.
  
     0.775
SFP40739.1
Hypothetical protein.
  
     0.775
SFP62534.1
TPR repeat.
  
     0.775
SFP73787.1
Hypothetical protein.
  
     0.775
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.