STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP01661.1Succinate dehydrogenase subunit A. (603 aa)    
Predicted Functional Partners:
SFP01613.1
Fumarate reductase subunit C.
 
 0.999
SFP01641.1
Fumarate reductase iron-sulfur subunit.
 0.999
SFP01594.1
Succinate dehydrogenase subunit D.
 
 0.998
SFP05324.1
Fumarate hydratase, class I.
  
 
 0.982
SFP17154.1
succinyl-CoA synthetase alpha subunit.
 0.978
SFP17176.1
succinyl-CoA synthetase beta subunit.
 0.975
SFP01685.1
Phosphatidylserine decarboxylase.
      0.933
SFP02078.1
Aromatic-amino-acid transaminase.
   
 0.933
SFP21191.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
    
  0.918
SFP11851.1
Argininosuccinate lyase.
     
 0.913
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.