STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP03803.1Ribosome-binding factor A. (149 aa)    
Predicted Functional Partners:
SFP03820.1
tRNA pseudouridine55 synthase.
  
 0.997
SFP03788.1
Translation initiation factor IF-2.
  
 0.995
SFP75830.1
Small subunit ribosomal protein S7.
   
 
 0.884
SFP02180.1
SSU ribosomal protein S18P.
   
 
 0.861
SFP41978.1
Small subunit ribosomal protein S15.
  
 
 0.858
SFP11033.1
SSU ribosomal protein S11P.
   
 
 0.857
SFP11455.1
Small subunit ribosomal protein S17.
   
 
 0.856
SFP03749.1
Ribosome maturation factor RimP.
 
 
 0.849
SFP11194.1
Small subunit ribosomal protein S5.
   
 
 0.849
SFP10998.1
Small subunit ribosomal protein S4.
  
 
 0.834
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.