STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP08430.17-cyano-7-deazaguanine synthase. (228 aa)    
Predicted Functional Partners:
SFP08486.1
7-carboxy-7-deazaguanine synthase.
 
 
 0.998
SFP17486.1
7-cyano-7-deazaguanine reductase.
 
 
 0.986
SFP08460.1
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase.
 
  
 0.971
SFP30488.1
Anaerobic ribonucleoside-triphosphate reductase activating protein.
  
 
 0.739
SFP35183.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
    
  0.471
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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