STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP09939.1Two-component system, NarL family, sensor histidine kinase BarA. (1092 aa)    
Predicted Functional Partners:
SFP17051.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.999
SFP23717.1
Two-component system, OmpR family, aerobic respiration control protein ArcA.
 0.999
SFP23738.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
  
 0.999
SFP23759.1
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
 
0.999
SFP24443.1
Two-component system, chemotaxis family, response regulator CheV.
 
 0.999
SFP44594.1
Two-component system, NarL family, invasion response regulator UvrY.
0.999
SFP54001.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 0.999
SFP57812.1
EAL domain-containing protein.
 0.999
SFP77665.1
Hypothetical protein.
 
0.999
SFP71537.1
Two-component system, OmpR family, response regulator.
 
0.998
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.