STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP10391.14Fe-4S dicluster domain-containing protein. (60 aa)    
Predicted Functional Partners:
SFP58053.1
Pyruvate ferredoxin oxidoreductase gamma subunit.
  
 0.957
SFP32273.1
NADPH-dependent glutamate synthase beta chain.
 
  
 0.922
SFP23859.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.921
SFO98567.1
Adenylylsulfate reductase subunit A.
  
 0.841
SFP01661.1
Succinate dehydrogenase subunit A.
  
 0.841
SFP01214.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
 0.746
SFP58121.1
Pyruvate ferredoxin oxidoreductase beta subunit.
  
 
 0.595
SFO98268.1
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits.
  
 
 0.568
SFP58099.1
Pyruvate ferredoxin oxidoreductase alpha subunit.
  
 
 0.564
SFO96528.1
FAD/FMN-containing dehydrogenase.
    
 0.547
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.