STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP17311.1Transketolase. (664 aa)    
Predicted Functional Partners:
SFP19089.1
Ribulose-phosphate 3-epimerase.
 0.996
SFP12939.1
Fructose-1,6-bisphosphatase II.
   
 0.981
SFP66342.1
Glucose-6-phosphate isomerase.
 
 0.974
SFP55490.1
Enolase.
   
 0.971
SFO97207.1
Glyceraldehyde 3-phosphate dehydrogenase.
 
 0.959
SFO96961.1
IMP dehydrogenase.
  
 
 0.958
SFP48934.1
Triosephosphate isomerase.
  
 0.958
SFP17269.1
Fructose-bisphosphate aldolase.
  
 
 0.955
SFP24166.1
Ribose-phosphate pyrophosphokinase.
   
 
 0.949
SFP07061.1
Pyruvate kinase.
  
 0.945
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.