STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP22123.1Cationic peptide transport system ATP-binding protein. (333 aa)    
Predicted Functional Partners:
SFP22107.1
Cationic peptide transport system permease protein.
 
 0.997
SFP22141.1
Cationic peptide transport system ATP-binding protein.
 
0.996
SFP22086.1
Cationic peptide transport system permease protein.
 
 0.995
SFP17117.1
Lipoprotein-releasing system ATP-binding protein.
 
  
  0.963
SFP00916.1
Multiple sugar transport system ATP-binding protein.
 
  
 
0.958
SFP22059.1
ABC-type transport system, substrate-binding protein.
 
 
 0.952
SFP24816.1
Sulfonate transport system ATP-binding protein.
 
   
 
0.948
SFP57864.1
NitT/TauT family transport system ATP-binding protein.
 
   
 
0.948
SFP24690.1
Putative ABC transport system ATP-binding protein.
 
  
  0.940
SFP00962.1
Polar amino acid transport system ATP-binding protein.
 
  
 
0.934
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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