STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP26328.1Hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase. (613 aa)    
Predicted Functional Partners:
SFP26269.1
Thiazole synthase.
 
 0.999
SFP26298.1
Thiamine biosynthesis protein ThiS.
  
 
 0.999
SFP26357.1
Phosphomethylpyrimidine synthase.
 
 0.999
SFP51529.1
Sulfur carrier protein.
  
 
 0.996
SFP26246.1
2-iminoacetate synthase.
  
 0.990
SFP68193.1
Thiamine-monophosphate kinase.
    
 0.974
SFP51500.1
Thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily.
 
 
 0.969
SFP51444.1
Adenylyltransferase and sulfurtransferase.
 
 
 0.964
SFO96961.1
IMP dehydrogenase.
   
 
 0.951
SFP01711.1
Ribosome biogenesis GTPase.
    
 0.923
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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