STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP28223.1Maltoporin. (448 aa)    
Predicted Functional Partners:
SFP52330.1
OmpA-OmpF porin, OOP family.
     
 0.843
SFP00892.1
Maltose/maltodextrin transport system permease protein.
 
  
 0.842
SFP21060.1
Maltose/maltodextrin transport system substrate-binding protein.
 
  
 0.839
SFP30465.1
Maltose/maltodextrin transport system substrate-binding protein.
 
  
 0.839
SFP00830.1
Maltose/maltodextrin transport system substrate-binding protein.
 
  
 0.838
SFP00846.1
Maltose/maltodextrin transport system substrate-binding protein.
 
  
 0.838
SFP39400.1
Maltose/maltodextrin transport system substrate-binding protein.
 
  
 0.838
SFP01838.1
Preprotein translocase subunit SecA.
    
 
 0.824
SFP00866.1
Maltose/maltodextrin transport system permease protein.
 
  
 0.805
SFP28243.1
Pentatricopeptide repeat domain-containing protein (PPR motif).
  
  
 0.786
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.