Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP29439.1 | SFP29458.1 | SAMN02910344_01000 | SAMN02910344_01001 | Type VI secretion system protein ImpA. | Type VI secretion system protein ImpB. | 0.980 |
SFP29439.1 | SFP29479.1 | SAMN02910344_01000 | SAMN02910344_01002 | Type VI secretion system protein ImpA. | Type VI secretion system protein ImpC. | 0.971 |
SFP29439.1 | SFP29505.1 | SAMN02910344_01000 | SAMN02910344_01003 | Type VI secretion system protein ImpA. | Type VI secretion system secreted protein Hcp. | 0.952 |
SFP29439.1 | SFP29531.1 | SAMN02910344_01000 | SAMN02910344_01004 | Type VI secretion system protein ImpA. | Type VI secretion system protein VasG. | 0.830 |
SFP29439.1 | SFP29552.1 | SAMN02910344_01000 | SAMN02910344_01005 | Type VI secretion system protein ImpA. | Type VI secretion system protein ImpC. | 0.896 |
SFP29439.1 | SFP29573.1 | SAMN02910344_01000 | SAMN02910344_01006 | Type VI secretion system protein ImpA. | Gene 25-like lysozyme. | 0.874 |
SFP29439.1 | SFP29594.1 | SAMN02910344_01000 | SAMN02910344_01007 | Type VI secretion system protein ImpA. | Type VI secretion protein, VC_A0110 family. | 0.876 |
SFP29439.1 | SFP29620.1 | SAMN02910344_01000 | SAMN02910344_01008 | Type VI secretion system protein ImpA. | Type VI secretion system protein ImpH. | 0.961 |
SFP29439.1 | SFP29744.1 | SAMN02910344_01000 | SAMN02910344_01013 | Type VI secretion system protein ImpA. | Type VI secretion protein, VC_A0114 family. | 0.895 |
SFP29439.1 | SFP29795.1 | SAMN02910344_01000 | SAMN02910344_01015 | Type VI secretion system protein ImpA. | ImcF-related N-terminal domain-containing protein. | 0.885 |
SFP29458.1 | SFP29439.1 | SAMN02910344_01001 | SAMN02910344_01000 | Type VI secretion system protein ImpB. | Type VI secretion system protein ImpA. | 0.980 |
SFP29458.1 | SFP29479.1 | SAMN02910344_01001 | SAMN02910344_01002 | Type VI secretion system protein ImpB. | Type VI secretion system protein ImpC. | 0.999 |
SFP29458.1 | SFP29505.1 | SAMN02910344_01001 | SAMN02910344_01003 | Type VI secretion system protein ImpB. | Type VI secretion system secreted protein Hcp. | 0.996 |
SFP29458.1 | SFP29531.1 | SAMN02910344_01001 | SAMN02910344_01004 | Type VI secretion system protein ImpB. | Type VI secretion system protein VasG. | 0.858 |
SFP29458.1 | SFP29552.1 | SAMN02910344_01001 | SAMN02910344_01005 | Type VI secretion system protein ImpB. | Type VI secretion system protein ImpC. | 0.997 |
SFP29458.1 | SFP29573.1 | SAMN02910344_01001 | SAMN02910344_01006 | Type VI secretion system protein ImpB. | Gene 25-like lysozyme. | 0.933 |
SFP29458.1 | SFP29594.1 | SAMN02910344_01001 | SAMN02910344_01007 | Type VI secretion system protein ImpB. | Type VI secretion protein, VC_A0110 family. | 0.925 |
SFP29458.1 | SFP29620.1 | SAMN02910344_01001 | SAMN02910344_01008 | Type VI secretion system protein ImpB. | Type VI secretion system protein ImpH. | 0.956 |
SFP29458.1 | SFP29744.1 | SAMN02910344_01001 | SAMN02910344_01013 | Type VI secretion system protein ImpB. | Type VI secretion protein, VC_A0114 family. | 0.964 |
SFP29458.1 | SFP29795.1 | SAMN02910344_01001 | SAMN02910344_01015 | Type VI secretion system protein ImpB. | ImcF-related N-terminal domain-containing protein. | 0.919 |
page 1 of 6