STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP32075.1Molybdate transport system ATP-binding protein. (358 aa)    
Predicted Functional Partners:
SFP32056.1
Molybdate transport system permease protein.
  
  0.997
SFP32035.1
Molybdate transport system substrate-binding protein.
 
  
 0.965
SFO98485.1
Sulfate transport system permease protein.
   
  0.920
SFP32116.1
Probable molybdopterin binding domain-containing protein.
 
     0.888
SFO98511.1
Sulfate transport system permease protein.
   
  0.855
SFP00980.1
Polar amino acid transport system substrate-binding protein.
   
 0.852
SFP32159.1
Cyclic pyranopterin phosphate synthase.
     0.828
SFP32015.1
Molybdenum cofactor synthesis domain-containing protein.
 
     0.811
SFP32094.1
Molybdopterin molybdotransferase.
      0.773
SFP53006.1
Ribosome-dependent ATPase.
  
 
0.756
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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