STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP33251.1Electron transport complex protein RnfA. (192 aa)    
Predicted Functional Partners:
SFP33277.1
Electron transport complex protein RnfB.
 
 0.995
SFP33297.1
Electron transport complex protein RnfC.
 
 0.993
SFP33320.1
Electron transport complex protein RnfD.
 
 
 0.987
SFP33340.1
Electron transport complex protein RnfG.
 
 
 0.981
SFP33361.1
Electron transport complex protein RnfE.
 
 
0.973
SFP24241.1
Thiamine biosynthesis lipoprotein.
 
  
 0.646
SFP19655.1
Na+-transporting NADH:ubiquinone oxidoreductase subunit B.
  
   
 0.435
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.